A Hybrid Symbolic-Statistical Approach to Modeling Metabolic Networks

نویسندگان

  • Marenglen Biba
  • Stefano Ferilli
  • Nicola Di Mauro
  • Teresa Maria Altomare Basile
چکیده

Biological systems consist of many components and interactions between them. In Systems Biology the principal problem is modeling complex biological systems and reconstructing interactions between their building blocks. Symbolic machine learning approaches have the power to model structured domains and relations among objects. However biological domains require uncertainty handling due to their hidden complex nature. Statistical machine learning approaches have the potential to model uncertainty in a robust manner. In this paper we apply a hybrid symbolic-statistical framework to modeling metabolic pathways and show through experiments that complex phenomenon such as biochemical reactions in cell’s metabolic networks can be modeled and simulated in the proposed framework.

برای دانلود رایگان متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Mining Time-series Sequences of Reactions for Biologically Active Patterns in Metabolic Pathways

Large quantities of metabolic profiling data are being gathered intensively in the rapidly growing field of Metabolomics. However, such data, in order to provide knowledge, must be machine-explored by robust methods that deal with complexity and uncertainty. Symbolic machine learning methods have the power to model structural and relational complexity while statistical machine learning ones pro...

متن کامل

Neuro-ACT Cognitive Architecture Applications in Modeling Driver’s Steering Behavior in Turns

Cognitive Architectures (CAs) are the core of artificial cognitive systems. A CA is supposed to specify the human brain at a level of abstraction suitable for explaining how it achieves the functions of the mind. Over the years a number of distinct CAs have been proposed by different authors and their limitations and potentials were investigated. These CAs are usually classified as symbolic and...

متن کامل

Optimal design of supply chain network under uncertainty environment using hybrid analytical and simulation modeling approach

Models that aim to optimize the design of supply chain networks have gained more interest in the supply chain literature. Mixed-integer linear programming and discrete-event simulation are widely used for such an optimization problem. We present a hybrid approach to support decisions for supply chain network design using a combination of analytical and discrete-event simulation models. The prop...

متن کامل

Probabilistic Integrated Planning of Primary and Secondary Distribution Networks based on a Hybrid Heuristic and GA Approach

The integrated planning of distribution system reveals a complex and non-linear problem being integrated with integer and discontinues variables. Due to these technical and modeling complexities, many researchers tend to optimize the primary and secondary distribution networks individually which depreciates the accuracy of the results. Accordingly, the integrated planning of these networks is p...

متن کامل

Integrating connectionist, statistical and symbolic approaches for continuous spoken Korean processing

This paper presents a multi-strategic and hybrid approach for large-scale integrated speech and natural language processing, employing connectionist, statistical and symbolic techniques. The developed spoken Korean processing engine (SKOPE) integrates connectionist TDNN-based phoneme recognition technique with statistical Viterbi-based lexical decoding and symbolic morphological/phonological an...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

عنوان ژورنال:

دوره   شماره 

صفحات  -

تاریخ انتشار 2007